Pairwise fitting emdb-1618 on emdb-1104 by gmfit



Pairwise fitting of target emdb-1618 on reference emdb-1104 by gmfit(PID:1535003).

RANK[1] Corr.Coeff:0.681 [JSmol] [Molmil]
TARGET(emdb-1618)
display:
color:
3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1618)]
REFERENCE(emdb-1104)
display:
color:
Global conformational rearrangements during the activation of the GDP/GTP exchange factor Vav3. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.681 0.629 0.567 0.543 0.507 0.447 0.416 0.393 0.316 0.283

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1104.map.gz", and read it.
  2. Download the Target map "emd_1618.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.260958,-0.033030,0.964785 143.007949 center 0,0,0 model #1
    move 211.305103,22.459598,-22.691457 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!