Pairwise fitting emdb-1565 on emdb-8004 by gmfit



Pairwise fitting of target emdb-1565 on reference emdb-8004 by gmfit(PID:4120085).

RANK[1] Corr.Coeff:0.939 [JSmol] [Molmil]
TARGET(emdb-1565)
display:
color:
Recognition of Phe-tRNAPhe, Trp-tRNATrp and : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1565)]
REFERENCE(emdb-8004)
display:
color:
RNC in complex with SRP with detached NG domain [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.939 0.870 0.758 0.743 0.742 0.742 0.709 0.708 0.686 0.684

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8004.map.gz", and read it.
  2. Download the Target map "emd_1565.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.998960,0.024630,0.038367 175.806673 center 0,0,0 model #1
    move 208.025710,212.005126,213.828987 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!