Pairwise fitting emdb-1565 on emdb-5360 by gmfit



Pairwise fitting of target emdb-1565 on reference emdb-5360 by gmfit(PID:1197405).

RANK[1] Corr.Coeff:0.954 [JSmol] [Molmil]
TARGET(emdb-1565)
display:
color:
Recognition of Phe-tRNAPhe, Trp-tRNATrp and : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1565)]
REFERENCE(emdb-5360)
display:
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New mRNA-tRNA translocation intermediates revealed by cryoEM: Class 3 (unrotated 70S ribosome with P-site tRNA) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.954 0.919 0.761 0.756 0.741 0.733 0.698 0.692 0.690 0.676

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5360.map.gz", and read it.
  2. Download the Target map "emd_1565.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.236149,-0.915582,-0.325491 2.710167 center 0,0,0 model #1
    move 1.562779,-0.607685,0.219922 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!