Pairwise fitting emdb-1559 on pdb-4atx by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-4atx by gmfit(PID:3768173).





RANK[1] Corr.Coeff:0.666

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-4atx)

display:



color:


b'RIGOR KINESIN MOTOR DOMAIN WITH AN ORDERED NECK-LINKER, DOCKED ON     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.666
0.655
0.639
0.637
0.606
0.601
0.596
0.595
0.585
0.582







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4atx"(PDB-format) or 
 "4atx"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.625441,0.034264,-0.779519 139.309241 center 0,0,0 model #1
move -344.695439,669.581268,17.208279 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!