Pairwise fitting emdb-1559 on pdb-3zx9 by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-3zx9 by gmfit(PID:4154455).





RANK[1] Corr.Coeff:0.621

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-3zx9)

display:



color:


b'CRYO-EM RECONSTRUCTION OF NATIVE AND EXPANDED TURNIP CRINKLE VIRUS    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.621
0.571
0.561
0.552
0.537
0.534
0.531
0.529
0.528
0.510







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3zx9"(PDB-format) or 
 "3zx9"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.275007,0.664651,-0.694702 19.530871 center 0,0,0 model #1
move -724.258001,-294.275623,-269.254207 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!