Pairwise fitting emdb-1559 on pdb-3m9i by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-3m9i by gmfit(PID:3780646).





RANK[1] Corr.Coeff:0.324

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-3m9i)

display:



color:


b'ELECTRON CRYSTALLOGRAPHIC STRUCTURE OF LENS AQUAPORIN-0 (AQP0) (LENS  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.324
0.318
0.304
0.274
0.271
0.250
0.163
0.153
0.149
0.146







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3m9i"(PDB-format) or 
 "3m9i"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.355665,0.906272,-0.228417 163.868903 center 0,0,0 model #1
move -1.652849,-406.809647,853.360999 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!