Pairwise fitting emdb-1559 on pdb-3iz1 by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-3iz1 by gmfit(PID:2227447).





RANK[1] Corr.Coeff:0.443

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-3iz1)

display:



color:


b'C-ALPHA MODEL FITTED INTO THE EM STRUCTURE OF CX26M34A                ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.443
0.409
0.385
0.380
0.379
0.379
0.378
0.376
0.371
0.366







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3iz1"(PDB-format) or 
 "3iz1"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.718908,0.448480,0.531072 138.316782 center 0,0,0 model #1
move 592.046513,-163.746327,667.327139 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!