Pairwise fitting emdb-1559 on pdb-2y7h by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-2y7h by gmfit(PID:2336420).





RANK[1] Corr.Coeff:0.719

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



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3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-2y7h)

display:



color:


b'ATOMIC MODEL OF THE DNA-BOUND METHYLASE COMPLEX FROM THE TYPE I       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.719
0.708
0.690
0.687
0.660
0.660
0.652
0.652
0.651
0.650







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2y7h"(PDB-format) or 
 "2y7h"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.635414,0.490281,-0.596552 112.073303 center 0,0,0 model #1
move -569.274179,607.196889,353.791975 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!