Pairwise fitting emdb-1559 on pdb-2c9g by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-2c9g by gmfit(PID:4037311).





RANK[1] Corr.Coeff:0.769

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

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3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-2c9g)

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color:


b'THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE           ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.769
0.761
0.742
0.740
0.740
0.738
0.737
0.732
0.728
0.705







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2c9g"(PDB-format) or 
 "2c9g"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.402195,0.173606,-0.898944 143.408844 center 0,0,0 model #1
move -345.402109,683.791689,-313.154929 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!