Pairwise fitting emdb-1559 on pdb-1ia0 by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-1ia0 by gmfit(PID:3900742).





RANK[1] Corr.Coeff:0.655

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-1ia0)

display:



color:


b'KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM                  ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.655
0.646
0.641
0.639
0.615
0.612
0.597
0.596
0.593
0.589







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1ia0"(PDB-format) or 
 "1ia0"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.591249,0.161587,-0.790135 155.175018 center 0,0,0 model #1
move -481.232918,577.685181,-241.970008 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!