Pairwise fitting emdb-1446 on emdb-6323 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-6323 by gmfit(PID:3503135).





RANK[1] Corr.Coeff:0.389

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-6323)

display:



color:


CryoEM single particle reconstruction of prolate head of bacteriophage T4 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.389
0.387
0.385
0.383
0.381
0.380
0.379
0.376
0.372
0.368







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6323.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.561627,-0.694989,0.448961 108.524582 center 0,0,0 model #1
move 7.183467,-11.447569,-2.478105 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!