Pairwise fitting emdb-1446 on emdb-5697 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-5697 by gmfit(PID:3809085).





RANK[1] Corr.Coeff:0.697

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-5697)

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Electron cryo-microscopy of human cytomegalovirus SCP-deficient particles [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.697
0.679
0.677
0.673
0.671
0.669
0.666
0.659
0.655
0.654







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5697.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.340926,-0.538981,-0.770239 18.519520 center 0,0,0 model #1
move 422.251201,419.391262,-231.013696 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!