Pairwise fitting emdb-1446 on emdb-3360 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-3360 by gmfit(PID:4161209).





RANK[1] Corr.Coeff:0.642

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-3360)

display:



color:


HSV bubblegram imaging [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.642
0.637
0.598
0.596
0.595
0.593
0.593
0.587
0.585
0.584







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3360.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.378845,-0.763560,0.522926 133.834290 center 0,0,0 model #1
move -9.801159,-7.827604,4.922166 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!