Pairwise fitting emdb-1446 on emdb-2445 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-2445 by gmfit(PID:3915677).





RANK[1] Corr.Coeff:0.583

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-2445)

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Cryo-electron tomography of the human Nuclear Pore Complex with nucleoporin 214 knockdown [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.583
0.565
0.565
0.556
0.550
0.549
0.540
0.540
0.446
0.446







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2445.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.193854,0.978693,-0.067681 165.011997 center 0,0,0 model #1
move 723.562446,714.313190,713.024210 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!