Pairwise fitting emdb-1446 on emdb-1575 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-1575 by gmfit(PID:2149544).





RANK[1] Corr.Coeff:0.324

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-1575)

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C-terminal domain of adenovirus serotype 5 protein IX assemble into an anti-parallel structure [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.324
0.314
0.313
0.313
0.311
0.310
0.305
0.304
0.302
0.299







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1575.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.371572,0.751541,0.545088 124.428996 center 0,0,0 model #1
move 64.865268,51.896780,547.120663 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!