Pairwise fitting emdb-1446 on emdb-1573 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-1573 by gmfit(PID:3634662).





RANK[1] Corr.Coeff:0.363

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-1573)

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The bacteriophage T4 procapsid in the process of DNA packaging [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.363
0.360
0.354
0.351
0.350
0.348
0.347
0.346
0.344
0.343







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1573.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.009916,0.985213,-0.171049 89.029306 center 0,0,0 model #1
move 5.024719,-11.096094,1.921680 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!