Pairwise fitting emdb-1446 on emdb-1572 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-1572 by gmfit(PID:1330522).





RANK[1] Corr.Coeff:0.364

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-1572)

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The T4 packaging motor, T4 procapsid with large terminase gp17 bound [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.364
0.359
0.354
0.354
0.353
0.350
0.348
0.347
0.343
0.342







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1572.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.690825,0.249992,0.678428 140.386812 center 0,0,0 model #1
move 1.270512,12.816159,1.923292 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!