Pairwise fitting emdb-1446 on emdb-1306 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-1306 by gmfit(PID:3308865).





RANK[1] Corr.Coeff:0.657

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-1306)

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Electron cryotomography reveals the portal in the herpesvirus capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.657
0.644
0.643
0.639
0.638
0.634
0.632
0.632
0.625
0.620







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1306.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.583555,0.080141,0.808110 166.302995 center 0,0,0 model #1
move 9.925640,7.482506,-0.822122 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!