Pairwise fitting emdb-1430 on pdb-4v5h by gmfit



Pairwise fitting of target emdb-1430 on reference pdb-4v5h by gmfit(PID:1192837).

RANK[1] Corr.Coeff:0.765 [JSmol] [Molmil]
TARGET(emdb-1430)
display:
color:
Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1430)]
REFERENCE(pdb-4v5h)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.765 0.748 0.746 0.716 0.702 0.698 0.696 0.687 0.684 0.669

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v5h"(PDB-format) or "4v5h"(mmCIF-format), and read it.
  2. Download the Target map "emd_1430.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.893908,0.244786,-0.375510 164.533599 center 0,0,0 model #1
    move -14.323093,-1.038996,-30.641087 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!