Pairwise fitting emdb-1430 on pdb-4adx by gmfit










Pairwise fitting of target emdb-1430 on reference pdb-4adx by gmfit(PID:2186130).





RANK[1] Corr.Coeff:0.835

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(pdb-4adx)

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b'THE CRYO-EM STRUCTURE OF THE ARCHAEAL 50S RIBOSOMAL SUBUNIT IN COMPLEX' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.835
0.758
0.755
0.738
0.720
0.719
0.718
0.713
0.713
0.695







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4adx"(PDB-format) or 
 "4adx"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.637414,0.758725,-0.134310 102.909163 center 0,0,0 model #1
move 152.020143,196.177829,159.403209 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!