Pairwise fitting emdb-1430 on emdb-6584 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-6584 by gmfit(PID:2195017).





RANK[1] Corr.Coeff:0.777

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-6584)

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The structure of elongation factor 4 (EF4/LepA) in GTP form bound to the ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.777
0.726
0.712
0.710
0.708
0.706
0.700
0.696
0.685
0.679







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6584.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.510676,-0.855733,0.083260 130.714406 center 0,0,0 model #1
move 218.153244,208.443375,177.577537 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!