Pairwise fitting emdb-1430 on emdb-5799 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-5799 by gmfit(PID:1428075).





RANK[1] Corr.Coeff:0.779

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-5799)

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Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.779
0.763
0.749
0.742
0.736
0.706
0.703
0.688
0.669
0.666







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5799.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.394580,-0.900626,0.182153 150.105029 center 0,0,0 model #1
move 154.569872,175.781440,130.656777 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!