Pairwise fitting emdb-1430 on emdb-5797 by gmfit



Pairwise fitting of target emdb-1430 on reference emdb-5797 by gmfit(PID:1410174).

RANK[1] Corr.Coeff:0.777 [JSmol] [Molmil]
TARGET(emdb-1430)
display:
color:
Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1430)]
REFERENCE(emdb-5797)
display:
color:
Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.777 0.762 0.752 0.741 0.712 0.699 0.696 0.694 0.690 0.688

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5797.map.gz", and read it.
  2. Download the Target map "emd_1430.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.396015,-0.888694,0.231075 153.340785 center 0,0,0 model #1
    move 157.340776,175.158187,130.333421 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!