Pairwise fitting emdb-1430 on emdb-5791 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-5791 by gmfit(PID:4009458).





RANK[1] Corr.Coeff:0.654

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

display:



color:



Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-5791)

display:



color:


Cryo-electron microscopy of an immature 50S ribosomal subunit (45S particle) from Bacillus subtilis depleted of RbgA (YlqF), conformation 3 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.654
0.612
0.609
0.586
0.579
0.579
0.569
0.568
0.557
0.556







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5791.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.589092,0.120864,-0.798976 147.040675 center 0,0,0 model #1
move 182.874196,155.190322,130.229025 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!