Pairwise fitting emdb-1430 on emdb-5790 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-5790 by gmfit(PID:3854454).





RANK[1] Corr.Coeff:0.699

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-5790)

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Cryo-electron microscopy of an immature 50S ribosomal subunit (45S particle) from Bacillus subtilis depleted of RbgA (YlqF), conformation 2 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.699
0.583
0.581
0.580
0.545
0.539
0.533
0.530
0.528
0.516







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5790.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.406994,0.539629,-0.736991 162.824360 center 0,0,0 model #1
move 182.050029,159.428687,135.056669 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!