Pairwise fitting emdb-1430 on emdb-2879 by gmfit










Pairwise fitting of target emdb-1430 on reference emdb-2879 by gmfit(PID:2408125).





RANK[1] Corr.Coeff:0.752

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(emdb-2879)

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The structure of the human mitochondrial ribosome (large subunit, masked) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.752
0.690
0.689
0.667
0.662
0.656
0.650
0.645
0.644
0.640







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2879.map.gz", and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.859104,0.397916,0.321873 172.393704 center 0,0,0 model #1
move 209.400267,225.510812,219.334586 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!