Pairwise fitting emdb-1390 on emdb-6357 by gmfit



Pairwise fitting of target emdb-1390 on reference emdb-6357 by gmfit(PID:1371881).

RANK[1] Corr.Coeff:0.509 [JSmol] [Molmil]
TARGET(emdb-1390)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1390)]
REFERENCE(emdb-6357)
display:
color:
Negative stain (RCT) surface of full-length glucagon receptor FAB complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.509 0.470 0.436 0.432 0.352 0.337 0.324 0.285 0.275 0.269

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6357.map.gz", and read it.
  2. Download the Target map "emd_1390.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.813285,-0.543891,0.206760 167.008901 center 0,0,0 model #1
    move -0.963995,6.042376,-1.510788 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!