Pairwise fitting emdb-1390 on emdb-6124 by gmfit










Pairwise fitting of target emdb-1390 on reference emdb-6124 by gmfit(PID:3593366).





RANK[1] Corr.Coeff:0.519

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1390)

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Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1390)]







REFERENCE(emdb-6124)

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color:


Structure of the F-actin-tropomyosin complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.519
0.500
0.467
0.462
0.311
0.263
0.259
0.256
0.248
0.231







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6124.map.gz", and read it.

  2.  Download the Target map "emd_1390.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.318584,0.816767,0.481036 174.630855 center 0,0,0 model #1
move 4.143654,0.701439,-3.574133 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!