Pairwise fitting emdb-1390 on emdb-5866 by gmfit



Pairwise fitting of target emdb-1390 on reference emdb-5866 by gmfit(PID:1070844).

RANK[1] Corr.Coeff:0.603 [JSmol] [Molmil]
TARGET(emdb-1390)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1390)]
REFERENCE(emdb-5866)
display:
color:
Single-particle reconstruction of conformation VI of ligand-free sGC [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.603 0.569 0.477 0.468 0.455 0.394 0.357 0.311 0.278 0.256

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5866.map.gz", and read it.
  2. Download the Target map "emd_1390.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.973753,0.226929,-0.017573 61.039764 center 0,0,0 model #1
    move 16.849689,-12.477989,17.711249 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!