Pairwise fitting emdb-1386 on emdb-1376 by gmfit



Pairwise fitting of target emdb-1386 on reference emdb-1376 by gmfit(PID:1104630).

RANK[1] Corr.Coeff:0.873 [JSmol] [Molmil]
TARGET(emdb-1386)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1386)]
REFERENCE(emdb-1376)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.873 0.596 0.589 0.477 0.425 0.412 0.245 0.232 0.226 0.203

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1376.map.gz", and read it.
  2. Download the Target map "emd_1386.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.999810,0.005099,-0.018815 0.324114 center 0,0,0 model #1
    move -0.146146,-0.067258,0.151374 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!