Pairwise fitting emdb-1384 on emdb-5882 by gmfit



Pairwise fitting of target emdb-1384 on reference emdb-5882 by gmfit(PID:1102097).

RANK[1] Corr.Coeff:0.624 [JSmol] [Molmil]
TARGET(emdb-1384)
display:
color:
Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1384)]
REFERENCE(emdb-5882)
display:
color:
Single-particle reconstruction of conformation II of GPCPP-bound sGC [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.624 0.616 0.497 0.488 0.412 0.382 0.248 0.216 0.177 0.171

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5882.map.gz", and read it.
  2. Download the Target map "emd_1384.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.891644,0.257286,0.372526 119.307855 center 0,0,0 model #1
    move 25.804725,-14.726559,17.042359 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!