Pairwise fitting emdb-1384 on emdb-1872 by gmfit










Pairwise fitting of target emdb-1384 on reference emdb-1872 by gmfit(PID:4159210).





RANK[1] Corr.Coeff:0.572

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1384)

display:



color:



Averaging tens to hundreds of icosahedral particle images to resolve protein secondary structure elements using a Multi-Path Simulated Annealing optimization algorithm. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1384)]







REFERENCE(emdb-1872)

display:



color:


Actin filament pointed end [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.572
0.515
0.511
0.438
0.346
0.322
0.315
0.267
0.242
0.238







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1872.map.gz", and read it.

  2.  Download the Target map "emd_1384.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.068813,0.534478,-0.842376 159.416692 center 0,0,0 model #1
move 62.665546,65.023667,81.179694 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!