Pairwise fitting emdb-1369 on pdb-3j0f by gmfit



Pairwise fitting of target emdb-1369 on reference pdb-3j0f by gmfit(PID:1638928).

RANK[1] Corr.Coeff:0.534 [JSmol] [Molmil]
TARGET(emdb-1369)
display:
color:
Progression of the ribosome recycling factor through the ribosome dissociates the two ribosomal subunits. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1369)]
REFERENCE(pdb-3j0f)
display:
color:
b'SINDBIS VIRION ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.534 0.492 0.477 0.465 0.462 0.462 0.461 0.451 0.447 0.432

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3j0f"(PDB-format) or "3j0f"(mmCIF-format), and read it.
  2. Download the Target map "emd_1369.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.171433,-0.862752,-0.475678 162.997500 center 0,0,0 model #1
    move 36.015747,50.928357,253.216149 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!