Pairwise fitting emdb-1315 on pdb-4v6y by gmfit










Pairwise fitting of target emdb-1315 on reference pdb-4v6y by gmfit(PID:3997872).





RANK[1] Corr.Coeff:0.808

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(pdb-4v6y)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.808
0.775
0.751
0.725
0.716
0.704
0.701
0.699
0.694
0.685







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6y"(PDB-format) or 
 "4v6y"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.180008,-0.946925,-0.266328 126.812766 center 0,0,0 model #1
move 178.669603,184.209204,191.067749 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!