Pairwise fitting emdb-1315 on emdb-8112 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-8112 by gmfit(PID:1366844).

RANK[1] Corr.Coeff:0.789 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-8112)
display:
color:
Structure of RelA bound to the 70S ribosome (catalytic domain conformation 4) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.789 0.756 0.734 0.705 0.704 0.699 0.695 0.684 0.677 0.672

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_8112.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.117605,-0.940085,-0.320016 133.646576 center 0,0,0 model #1
    move 270.031277,267.129909,264.683875 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!