Pairwise fitting emdb-1315 on emdb-5030 by gmfit










Pairwise fitting of target emdb-1315 on reference emdb-5030 by gmfit(PID:4138874).





RANK[1] Corr.Coeff:0.788

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1315)

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Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1315)]







REFERENCE(emdb-5030)

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GTPase activation of elongation factor EF-Tu by the ribosome during decoding: a cryo-EM structure of the  Thermus thermophilus ribosome in which the ternary complex of EF-Tu, tRNA and guanine nucleotide has been trapped on the ribosome with the antibiotic kirromycin. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.788
0.758
0.741
0.721
0.685
0.670
0.666
0.662
0.642
0.641







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5030.map.gz", and read it.

  2.  Download the Target map "emd_1315.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.129831,-0.118451,-0.984435 175.630537 center 0,0,0 model #1
move -2.043992,-4.084448,-0.861183 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!