Pairwise fitting emdb-1315 on emdb-1003 by gmfit



Pairwise fitting of target emdb-1315 on reference emdb-1003 by gmfit(PID:3718520).

RANK[1] Corr.Coeff:0.789 [JSmol] [Molmil]
TARGET(emdb-1315)
display:
color:
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1315)]
REFERENCE(emdb-1003)
display:
color:
Solution structure of the E. coli 70S ribosome at 11.5 A resolution. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.789 0.745 0.743 0.714 0.692 0.683 0.682 0.677 0.666 0.661

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1003.map.gz", and read it.
  2. Download the Target map "emd_1315.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.075663,-0.073851,-0.994395 173.298699 center 0,0,0 model #1
    move -0.642722,-0.213962,-3.127761 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!