Pairwise fitting emdb-1311 on emdb-5360 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-5360 by gmfit(PID:4168150).





RANK[1] Corr.Coeff:0.920

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-5360)

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New mRNA-tRNA translocation intermediates revealed by cryoEM: Class 3 (unrotated 70S ribosome with P-site tRNA) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.920
0.888
0.713
0.707
0.685
0.679
0.659
0.649
0.645
0.641







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5360.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.131344,-0.801206,-0.583796 4.528633 center 0,0,0 model #1
move -3.938340,-0.533985,-5.032921 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5360)]

[Download the target GMM(emdb 1311)]

[Download gmfit result file(4168150)]