Pairwise fitting emdb-1311 on emdb-4135 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-4135 by gmfit(PID:3926913).





RANK[1] Corr.Coeff:0.843

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-4135)

display:



color:


Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.843
0.797
0.729
0.728
0.690
0.690
0.689
0.650
0.647
0.641







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4135.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.084116,-0.918613,-0.386103 17.933599 center 0,0,0 model #1
move 276.881691,279.221885,271.377097 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!