Pairwise fitting emdb-1311 on emdb-3039 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-3039 by gmfit(PID:3940523).





RANK[1] Corr.Coeff:0.859

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-3039)

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Cryo-EM structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ) and the UAG stop codon [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.859
0.748
0.724
0.718
0.714
0.710
0.707
0.686
0.685
0.679







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3039.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.046979,-0.958371,-0.281635 20.405093 center 0,0,0 model #1
move 274.006739,281.748719,272.000118 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!