Pairwise fitting emdb-1311 on emdb-2646 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2646 by gmfit(PID:1533110).





RANK[1] Corr.Coeff:0.855

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2646)

display:



color:


Structure of the mammalian ribosome-Sec61 complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.855
0.755
0.749
0.726
0.715
0.711
0.699
0.684
0.680
0.679







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2646.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.065766,-0.971815,-0.226385 17.510182 center 0,0,0 model #1
move 283.588428,275.778777,275.367653 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!