Pairwise fitting emdb-1311 on emdb-2599 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2599 by gmfit(PID:1508151).





RANK[1] Corr.Coeff:0.875

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2599)

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color:


Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.875
0.757
0.753
0.730
0.730
0.722
0.720
0.717
0.686
0.685







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2599.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.095888,-0.921284,-0.376885 15.740971 center 0,0,0 model #1
move 219.886401,210.115448,212.365768 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!