Pairwise fitting emdb-1311 on emdb-2008 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-2008 by gmfit(PID:4147202).





RANK[1] Corr.Coeff:0.768

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

display:



color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-2008)

display:



color:


3D reconstruction of a translating yeast 80S ribosome in complex with Dom34p and Rli1p [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.768
0.726
0.697
0.695
0.685
0.671
0.668
0.657
0.654
0.648







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2008.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.674978,0.685022,0.274133 150.711971 center 0,0,0 model #1
move -6.397543,-6.222791,2.117501 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!