Pairwise fitting emdb-1311 on emdb-1666 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1666 by gmfit(PID:2558852).





RANK[1] Corr.Coeff:0.763

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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color:



Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1666)

display:



color:


Alpha-helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.763
0.740
0.707
0.691
0.678
0.677
0.665
0.651
0.648
0.645







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1666.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.108882,0.145153,0.983400 179.161828 center 0,0,0 model #1
move 1.987480,-13.493394,-10.894489 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!