Pairwise fitting emdb-1311 on emdb-1554 by gmfit










Pairwise fitting of target emdb-1311 on reference emdb-1554 by gmfit(PID:3481551).





RANK[1] Corr.Coeff:0.849

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1311)

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Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1311)]







REFERENCE(emdb-1554)

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Pretranslocation ribosome. Group after ML3D classification. Non-racheted and classical tRNA positions. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.849
0.671
0.646
0.640
0.634
0.623
0.606
0.599
0.591
0.588







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1554.map.gz", and read it.

  2.  Download the Target map "emd_1311.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.670144,0.742231,0.000522 179.396349 center 0,0,0 model #1
move 1.394595,-4.674524,5.092977 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!