Pairwise fitting emdb-1311 on emdb-1391 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-1391 by gmfit(PID:1354422).

RANK[1] Corr.Coeff:0.508 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-1391)
display:
color:
Structured mRNAs regulate translation initiation by binding to the platform of the ribosome. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.508 0.459 0.450 0.448 0.443 0.419 0.416 0.414 0.407 0.399

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1391.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.634201,-0.468580,0.614997 168.223168 center 0,0,0 model #1
    move 4.270015,-9.084792,11.790736 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!