Pairwise fitting emdb-1311 on emdb-1122 by gmfit



Pairwise fitting of target emdb-1311 on reference emdb-1122 by gmfit(PID:1328221).

RANK[1] Corr.Coeff:0.919 [JSmol] [Molmil]
TARGET(emdb-1311)
display:
color:
Cryo-EM visualization of transfer messenger RNA with two SmpBs in a stalled ribosome. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1311)]
REFERENCE(emdb-1122)
display:
color:
Visualizing tmRNA entry into a stalled ribosome. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.919 0.718 0.710 0.695 0.690 0.668 0.660 0.648 0.638 0.637

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1122.map.gz", and read it.
  2. Download the Target map "emd_1311.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.717695,0.653876,0.239498 1.508349 center 0,0,0 model #1
    move -5.282311,-2.653123,-2.141930 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!