Pairwise fitting emdb-1252 on pdb-2r1g by gmfit










Pairwise fitting of target emdb-1252 on reference pdb-2r1g by gmfit(PID:4045464).





RANK[1] Corr.Coeff:0.434

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(pdb-2r1g)

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b'COORDINATES OF THE THERMUS THERMOPHILUS 30S COMPONENTS NEIGHBORING    ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.434
0.349
0.343
0.322
0.322
0.315
0.293
0.282
0.246
0.244







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2r1g"(PDB-format) or 
 "2r1g"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.378701,0.871617,-0.311238 136.388049 center 0,0,0 model #1
move -187.494876,-17.113828,281.623526 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!