Pairwise fitting emdb-1252 on emdb-6210 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-6210 by gmfit(PID:4091894).





RANK[1] Corr.Coeff:0.555

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-6210)

display:



color:


Structure of 20S supercomplex with V7-SNARE determined by single particle cryoelectron microscopy [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.555
0.485
0.477
0.468
0.458
0.449
0.434
0.420
0.419
0.410







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6210.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.036967,0.562308,0.826101 126.813411 center 0,0,0 model #1
move 130.476371,-228.916410,-120.280671 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!