Pairwise fitting emdb-1252 on emdb-1246 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-1246 by gmfit(PID:2527224).





RANK[1] Corr.Coeff:0.559

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

display:



color:



Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-1246)

display:



color:


Distribution and three-dimensional structure of AIDS virus envelope spikes. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.559
0.542
0.531
0.521
0.503
0.491
0.480
0.436
0.389
0.371







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1246.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.382018,-0.595749,-0.706503 145.915247 center 0,0,0 model #1
move 250.039506,75.214821,-142.808026 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!